Research in Computational Molecular Biology: 12th Annual International Conference, RECOMB 2008, Singapore, March 30 - April 2, 2008, ProceedingsMartin Vingron, Limsoon Wong Springer, 3 thg 4, 2008 - 480 trang This book constitutes the refereed proceedings of the 12th Annual International Conference on Research in Computational Molecular Biology, RECOMB 2008. It presents current issues in algorithmic, theoretical, and experimental bioinformatics. |
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A DNA CompositionBased Algorithm for Binning Environmental Shotgun Reads | 17 |
Reconstructing the Evolutionary History of Complex Human Gene Clusters | 29 |
Ab Initio Whole Genome Shotgun Assembly with Mated Short Reads | 50 |
Orchestration of DNA Methylation | 65 |
A Bayesian Hierarchical HMM for CisRegulatory Module Decoding in Metazoan Genomes | 66 |
A Combined ExpressionInteraction Model for Inferring the Temporal Activity of Transcription Factors | 82 |
How Did Folded Proteins Evolve? | 272 |
Locating Multiple Gene Duplications through Reconciled Trees | 273 |
Rapid and Accurate Protein Side Chain Prediction with Local Backbone Information | 285 |
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins | 300 |
DLIGHT Lateral Gene Transfer Detection Using Pairwise Evolutionary Distances in a Statistical Framework | 315 |
Computation of Median Gene Clusters | 331 |
From Translocation to Therapy | 346 |
Detecting DiseaseSpecific Dysregulated Pathways Via Analysis of Clinical Expression Profiles | 347 |
A Fast AlignmentFree ConservationBased Method for Transcription Factor Binding Site Discovery | 98 |
The Statistical Power of Phylogenetic Motif Models | 112 |
Transcriptional Regulation andCancer Genomics | 127 |
Automatic Recognition of Cells ARC for 3D Images of C elegans | 128 |
Using Multiple Mass Spectra for De Novo Peptide Sequencing | 140 |
A Fragmentation Event Model for Peptide Identification by Mass Spectrometry | 154 |
A Bayesian Approach to Protein Inference Problem in Shotgun Proteomics | 167 |
De Novo Sequencing of Nonribosomal Peptides | 181 |
Systems Metabolic Engineering | 196 |
Protein Function Prediction Based on Patterns in Biological Networks | 197 |
Automatic Parameter Learning for Multiple Network Alignment | 214 |
An Integrative Network Approach to Map the Transcriptome to the Phenome | 232 |
Fast and Accurate Alignment of Multiple Protein Networks | 246 |
HighResolution Modeling of Cellular Signaling Networks | 257 |
Constructing Treatment Portfolios Using Affinity Propagation | 360 |
Alternative Splicing Events of Arbitrary Dimension in Splicing Graphs | 372 |
More Efficient Algorithms for Closest String and Substring Problems | 396 |
Disruption of a Transcriptional Regulatory Pathway Contributes to Phenotypes in Carriers of Ataxia Telangiectasia | 410 |
Accounting for Nongenetic Factors Improves the Power of eQTL Studies | 411 |
Effects of Genetic Divergence in Identifying Ancestral Origin Using HAPAA | 423 |
On the Inference of Ancestries in Admixed Populations | 424 |
Increasing Power in Association Studies by Using Linkage Disequilibrium Structure and Molecular Function as Prior Information | 434 |
Panel Construction for Mapping in Admixed Populations Via Expected Mutual Information | 435 |
Constructing Level2 Phylogenetic Networks from Triplets | 450 |
Accurate Computation of Likelihoods in the Coalescent with Recombination Via Parsimony | 463 |
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Thuật ngữ và cụm từ thông dụng
accuracy activity levels algorithm alternative splicing amino acid analysis ancestral annotation neighborhood approach BayCis Bayesian bidirected graph Bioinformatics Biol biological breakpoint breakpoint sets bubble cells closest substring complexes compute conserved corresponding database datasets denote detection distance duplication edge estimate evolutionary exons expression levels factors feature fragmentation gene clusters gene duplications gene expression Gene Ontology gene trees genetic genome Gibbs sampling GO term Græmlin graph identified inference input intron iteration Jensen-Shannon divergence level-2 network LGT event likelihood LNBI markers mass spectrometry matching method microarray multiple network alignment nodes optimal orthologous pairs pairwise parameters peaks peptide perturbation phenotype position prediction probability problem protein interaction network proteomics PTMM RECOMB recombination regulatory rotamer sample scoring function segment side chain simulated SNPs species spectra spectrum splicing string structure subnetwork transcripts triplets variants vector vertex vertices Vingron yeast